PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0173s0020.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 203aa    MW: 22711.5 Da    PI: 9.7299
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0173s0020.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.59.9e-31108455128
                     NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             e+e yfFs+r+ ky++g+r+nrat +gyWkatg dk++l++ ++++vg+kktLvfy+g+ p+g++tdW+mheyrl
  SapurV1A.0173s0020.2.p  10 EQERYFFSTREAKYPNGNRSNRATGTGYWKATGIDKQILTSkGNQAVGMKKTLVFYRGKPPHGTRTDWIMHEYRL 84 
                             5689**********************************99857778***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100537.1871120IPR003441NAC domain
SuperFamilySSF1019412.48E-3510120IPR003441NAC domain
PfamPF023655.5E-141384IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MGFVGSGDLE QERYFFSTRE AKYPNGNRSN RATGTGYWKA TGIDKQILTS KGNQAVGMKK  60
TLVFYRGKPP HGTRTDWIMH EYRLAITETA ACNTPLNKNS IQGSVVVPME NWVLCRIFLK  120
KRSAKNGEEN IQLGDDNRLS KLRITKPVFY DFMTKNRTTD LNLAPSSSSS GSSGITEVSC  180
NESDDHEESS SCNSFPYFRR KP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swp_D4e-321012673174NAC domain-containing protein 19
3swp_C4e-321012673174NAC domain-containing protein 19
3swp_B4e-321012673174NAC domain-containing protein 19
3swp_A4e-321012673174NAC domain-containing protein 19
3swm_D4e-321012673174NAC domain-containing protein 19
3swm_C4e-321012673174NAC domain-containing protein 19
3swm_B4e-321012673174NAC domain-containing protein 19
3swm_A4e-321012673174NAC domain-containing protein 19
4dul_B4e-321012670171NAC domain-containing protein 19
4dul_A4e-321012670171NAC domain-containing protein 19
1ut7_B4e-321012670171NO APICAL MERISTEM PROTEIN
1ut7_A4e-321012670171NO APICAL MERISTEM PROTEIN
1ut4_B4e-321012670171NO APICAL MERISTEM PROTEIN
1ut4_A4e-321012670171NO APICAL MERISTEM PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7700120.0KP770012.1 Populus tomentosa apical meristem (NAM) family protein (Potri.001G061200) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020822.11e-128PREDICTED: NAC transcription factor ONAC010-like
SwissprotQ9FY932e-66NAC83_ARATH; NAC domain-containing protein 83
TrEMBLB9GZC31e-126B9GZC3_POPTR; No apical meristem family protein
STRINGPOPTR_0003s16490.11e-126(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-66NAC domain containing protein 83